Model. SIMULATE. CODE.
In silico modeling and custom software solutions for researchers, biotech, and pharma.
Model. SIMULATE. CODE.
In silico modeling and custom software solutions for researchers, biotech, and pharma.
Welcome to In Silico Scientist
Hi, I'm Blake A. Wilson, PhD. As a scientific consultant (independent contractor), I specialize in advancing scientific projects through custom computational models, simulations, and open-source software solutions. Let’s collaborate—I’d love to be your In Silico Scientist!
Core Capabilities
In Silico Modeling
Scientific Software & Workflow Development
Scientific Software & Workflow Development
From mechanistic to empirical and data-driven models, I help you leverage open-source tools to develop and simulate systems at molecular, cellular, and organismal scales.
Model and analysis types include:
- Pharmacological & Pharmaceutical
- Compartmental pharmacokinetics and pharmacodynamics (PK/PD)
- Non-compartmental PK analysis (NCA)
- Quantitative systems pharmacology (QSP)
- Physiologic-based pharmacokinetics (PBPK)
- Dose-response modeling
- Cellular, Molecular, and Systems Biology
- Signal transduction and biochemical reaction networks (ODE, PDE, stochastic, and hybrid models)
- Molecular dynamics and free energy simulation
Scientific Software & Workflow Development
Scientific Software & Workflow Development
Scientific Software & Workflow Development
From prototyping new algorithms to custom dashboards and pipelines, I help you develop custom software tools and simulation workflows.
Capabilities include:
- Simulation & Modeling Infrastructure
- Custom enhancements and extensions for open-source modeling frameworks
- Integrating modeling tools and open-source frameworks
- Custom modeling and analysis dashboards (Streamlit)
- Scientific Sofware Engineering
- Custom modeling and analysis tools (Python, Julia, and C++)
- Software scaling and optimization for HPC and cloud computing
- Workflow Automation & Tooling
- Custom simulation pipelines
- Data preprocessing and analysis pipelines
- Containerization (Docker, Singularity/Apptainer)
Startups: Kickstart Your In Silico Science!
Limited free consulting for early-stage startups
Do you have a scientific idea or challenge that you're unsure how to approach computationally? I offer a limited number of 45-minute consultations each month for qualified early-stage startups.
In this session, we’ll discuss your company’s goals, scientific needs, and potential opportunities for modeling, simulation, or custom software development.
You’ll receive a short follow-up report outlining:
- Potential modeling or technical approaches
- Key questions to resolve
- How I could potentially help you move forward
This is a no-obligation conversation designed to help early-stage teams kickstart their in silico science.
Who This Is For:
- Pre-seed to Series A startups in biotech & pharma
- Founders or scientists looking for modeling, simulation, or custom software expertise
- Small teams with a novel challenge
